2W7O: Structure and Activity of Bypass Synthesis by Human DNA Polymerase Kappa Opposite the 7,8-Dihydro-8-oxodeoxyguanosine Adduct

PDB ID: 2W7ODownload
MMDB ID: 73270
PDB Deposition Date: 2008/12/23
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 3.16  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 2W7O: trimeric; determined by author and by software (PISA)
Molecular Components in 2W7O
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase Kappa
Molecule annotation
Nucleotides(2 molecules)
1
5'-d(*gp*gp*gp*gp*gp*ap*ap*gp*gp*ap*tp*tp*c)-3'
Molecule annotation
1
5'-d(tp*cp*ap*cp*8ogp*gp*ap*ap*tp*cp*cp*tp* Tp*cp*cp*cp*cp*c)-3'
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
2
2
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303