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2Y4A:
Unexpected tricovalent binding mode of boronic acids within the active site of a penicillin binding protein
PDB ID:
2Y4A
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MMDB ID:
93123
PDB Deposition Date:
2011/1/5
Updated in MMDB:
2023/12
Experimental Method:
x-ray diffraction
Resolution:
2.7 Å
Source Organism:
Actinomadura sp. R39
Similar Structures:
VAST+
Download sequence data
Biological Unit for 2Y4A: monomeric; determined by author and by software (PISA)
Molecular Components in 2Y4A
Label
Count
Molecule
Protein (1 molecule)
A
1
D-alanyl-d-alanine Carboxypeptidase
Chemicals and Non-standard biopolymers (8 molecules)
1
1
{[(2-chlorobenzoyl)amino]methyl}boronic acid
2
5
SULFATE ION
3
2
MAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303