3PEY: S. cerevisiae Dbp5 bound to RNA and ADP BeF3

PDB ID: 3PEYDownload
MMDB ID: 89402
PDB Deposition Date: 2010/10/27
Updated in MMDB: 2017/11
Experimental Method:
x-ray diffraction
Resolution: 1.401  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 3PEY: dimeric; determined by author and by software (PISA)
Molecular Components in 3PEY
Label Count Molecule
Protein (1 molecule)
1
Atp-dependent RNA Helicase Dbp5
Molecule annotation
Nucleotide(1 molecule)
1
RNA (5'-r(p*up*up*up*up*up*u)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
1
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
2
3
MAGNESIUM IONMAGNESIUM ION
3
1
BERYLLIUM TRIFLUORIDE IONBERYLLIUM TRIFLUORIDE ION
4
4
NITRATE IONNITRATE ION
5
1
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303