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4OJX:
crystal structure of yeast phosphodiesterase-1 in complex with GMP
PDB ID:
4OJX
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MMDB ID:
125200
PDB Deposition Date:
2014/1/21
Updated in MMDB:
2014/12
Experimental Method:
x-ray diffraction
Resolution:
1.31 Å
Source Organism:
Saccharomyces cerevisiae S288C
Similar Structures:
VAST+
Download sequence data
Biological Unit for 4OJX: dimeric; determined by author and by software (PISA)
Molecular Components in 4OJX
Label
Count
Molecule
Proteins (2 molecules)
A
A_1
2
3',5'-cyclic-nucleotide Phosphodiesterase 1
(Gene symbol:
PDE1
)
Chemicals and Non-standard biopolymers (8 molecules)
1
2
(4S)-2-METHYL-2,4-PENTANEDIOL
2
2
GUANOSINE-5'-MONOPHOSPHATE
3
4
ZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303