4WO4: The molecular bases of Delta/Alpha beta T cell-mediated antigen recognition

PDB ID: 4WO4Download
MMDB ID: 125136
PDB Deposition Date: 2014/10/15
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.5  Å
Source Organism:
Similar Structures:
Biological Unit for 4WO4: tetrameric; determined by author and by software (PISA)
Molecular Components in 4WO4
Label Count Molecule
Proteins (4 molecules)
1
Antigen-presenting Glycoprotein Cd1d
(Gene symbol: CD1D)
Molecule annotation
1
Beta-2-microglobulin
(Gene symbol: B2M)
Molecule annotation
1
TCR Variable Delta 1 Chain and TCR Constant Alpha
Molecule annotation
1
TCR Variable Beta 2 (Trvb20) Chain and TCR Constant Beta
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
6
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
beta-D-mannopyranosebeta-D-mannopyranose
3
2
alpha-L-fucopyranosealpha-L-fucopyranose
4
1
(15Z)-N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]tetracos-15-enamide(15Z)-N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]tetracos-15-enamide
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303