5E3H: Structural Basis for RNA Recognition and Activation of RIG-I

PDB ID: 5E3HDownload
MMDB ID: 134311
PDB Deposition Date: 2015/10/2
Updated in MMDB: 2015/11
Experimental Method:
x-ray diffraction
Resolution: 2.7  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 5E3H: trimeric; determined by author and by software (PISA)
Molecular Components in 5E3H
Label Count Molecule
Protein (1 molecule)
1
Probable Atp-dependent RNA Helicase Ddx58
Molecule annotation
Nucleotides(2 molecules)
2
RNA (5'-r(*cp*gp*ap*cp*gp*cp*up*ap*gp*cp*gp*u)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
1
ZINC IONZINC ION
2
3
MAGNESIUM IONMAGNESIUM ION
3
1
GLYCEROLGLYCEROL
4
1
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
5
1
BERYLLIUM TRIFLUORIDE IONBERYLLIUM TRIFLUORIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303