5KD8: BT_4244 metallopeptidase in complex with Tn antigen

PDB ID: 5KD8Download
MMDB ID: 146234
PDB Deposition Date: 2016/6/7
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.3  Å
Source Organism:
Similar Structures:
Biological Unit for 5KD8: monomeric; determined by author and by software (PISA)
Molecular Components in 5KD8
Label Count Molecule
Protein (1 molecule)
1
Metallopeptidase
(Gene symbol: BT_4244)
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
1
ZINC IONZINC ION
2
2
NICKEL (II) IONNICKEL (II) ION
3
2
SODIUM IONSODIUM ION
4
1
SERINESERINE
5
1
2-acetamido-2-deoxy-alpha-D-galactopyranose2-acetamido-2-deoxy-alpha-D-galactopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303