5KDU: ZmpB metallopeptidase in complex with a2,6-Sialyl T-antigen

PDB ID: 5KDUDownload
MMDB ID: 146238
PDB Deposition Date: 2016/6/8
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2  Å
Source Organism:
Similar Structures:
Biological Unit for 5KDU: monomeric; determined by author and by software (PISA)
Molecular Components in 5KDU
Label Count Molecule
Protein (1 molecule)
1
F5/8 Type C Domain Protein
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
1
2-acetamido-2-deoxy-alpha-D-galactopyranose2-acetamido-2-deoxy-alpha-D-galactopyranose
2
1
beta-D-galactopyranosebeta-D-galactopyranose
3
1
N-acetyl-alpha-neuraminic acidN-acetyl-alpha-neuraminic acid
4
9
1,2-ETHANEDIOL1,2-ETHANEDIOL
5
1
ZINC IONZINC ION
6
1
SERINESERINE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303