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5T2A:
CryoEM structure of the Leishmania donovani 80S ribosome at 2.9 Angstrom resolution
PDB ID:
5T2A
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MMDB ID:
171337
PDB Deposition Date:
2016/8/23
Updated in MMDB:
2021/02
Experimental Method:
electron microscopy
Resolution:
2.9 Å
Source Organism:
Leishmania donovani
Similar Structures:
VAST+
Download sequence data
Molecular Components in 5T2A
Label
Count
Molecule
Proteins (71 molecules)
I
1
El18
J
1
Ul16
K
1
UL5
L
1
El13
M
1
Ul13
N
1
El14
O
1
El15
P
1
Ul22
Q
1
El20
R
1
El19
S
1
El21
T
1
El22
U
1
Ul14
V
1
Ul23
W
1
El24
X
1
Ul24
Y
1
El27
Z
1
Ul15
a
1
El28
b
1
El29
c
1
UL2
d
1
UL3
e
1
El30
f
1
El31
g
1
El32
h
1
El34
i
1
Ul29
j
1
El33
k
1
El36
l
1
El37
m
1
El43
n
1
El38
o
1
El39
p
1
UL4
q
1
El40
r
1
El42
s
1
Ul18
t
1
EL6
u
1
Ul30
v
1
EL8
w
1
UL6
0
1
ES1
1
1
ES4
3
1
ES6
4
1
ES7
5
1
ES8
6
1
US4
7
1
Rack1
8
1
Us14
AC
1
US2
AD
1
Es10
AE
1
Us17
AG
1
Us15
AH
1
Us11
AI
1
Us19
AJ
1
US8
AK
1
US9
AL
1
Es17
AM
1
Us13
AN
1
US7
AO
1
Es19
AP
1
US5
AQ
1
Us10
AR
1
Es21
AS
1
Us12
AT
1
Es24
AV
1
Es26
AW
1
Es27
AX
1
US3
AY
1
Es30
AZ
1
Es28
Nucleotides(9 molecules)
A
1
Lsu-alpha
B
1
Lsu-beta
C
1
5.8s rRNA
D
1
5S rRNA
E
1
Srrna1
F
1
Srrna3
G
1
Srrna2
H
1
Srrna4
2
1
18S rRNA
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303