5UUH: Bacillus cereus DNA glycosylase AlkD bound to a yatakemycin-adenine nucleobase adduct and DNA containing a fluorinated abasic site (9-mer product complex)

PDB ID: 5UUHDownload
MMDB ID: 152866
PDB Deposition Date: 2017/2/16
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 1.569  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 5UUH: trimeric; determined by author and by software (PISA)
Molecular Components in 5UUH
Label Count Molecule
Protein (1 molecule)
1
DNA-7-methylguanine Glycosylase
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*ap*gp*gp*cp*ap*(orf)p*ap*gp*c)-3')
Molecule annotation
1
DNA (5'-d(*tp*gp*cp*tp*tp*tp*gp*cp*c)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
CALCIUM IONCALCIUM ION
2
1
yatakemycin-adenine nucleobase adductyatakemycin-adenine nucleobase adduct
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303