5VOD: Crystal structure of HCMV Pentamer in complex with neutralizing antibody 9I6

PDB ID: 5VODDownload
MMDB ID: 152514
PDB Deposition Date: 2017/5/2
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 5.9  Å
Source Organism:
Human herpesvirus 5 strain Merlin▼
Similar Structures:
Biological Unit for 5VOD: heptameric; determined by author
Molecular Components in 5VOD
Label Count Molecule
Proteins (7 molecules)
1
Envelope Glycoprotein H
Molecule annotation
1
Envelope Glycoprotein L
Molecule annotation
1
Envelope Glycoprotein Ul128
Molecule annotation
1
Envelope Glycoprotein Ul130
Molecule annotation
1
Envelope Glycoprotein Ul131a
Molecule annotation
1
FAB 9I6 Heavy Chain
Molecule annotation
1
FAB 9I6 Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (21 molecules)
1
12
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
5
beta-D-mannopyranosebeta-D-mannopyranose
3
4
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303