NCBI
National Center for
Biotechnology Information
Search
5W5D:
Crystal structure of the primed SNARE-Complexin-Synaptotagmin-1 C2B complex
PDB ID:
5W5D
Download
MMDB ID:
153978
PDB Deposition Date:
2017/6/14
Updated in MMDB:
2023/10
Experimental Method:
x-ray diffraction
Resolution:
2.496 Å
Source Organism:
Rattus norvegicus
Similar Structures:
VAST+
Download sequence data
Biological Unit for 5W5D: dodecameric; determined by author
Molecular Components in 5W5D
Label
Count
Molecule
Proteins (12 molecules)
A
A_1
2
Vesicle-associated Membrane Protein 2
(Gene symbol:
Vamp2
)
B
B_1
2
Syntaxin-1a
(Gene symbol:
Stx1a
)
C
C_1
2
Synaptosomal-associated Protein 25
(Gene symbol:
Snap25
)
D
D_1
2
Synaptosomal-associated Protein 25
(Gene symbol:
Snap25
)
E
E_1
2
Complexin-1
(Gene symbol:
Cplx1
)
F
F_1
2
Synaptotagmin-1
(Gene symbol:
Syt1
)
Chemicals and Non-standard biopolymers (2 molecules)
1
2
MAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303