5ZWM: Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.4~4.6 angstrom (tri-snRNP and U2 snRNP Part)

PDB ID: 5ZWMDownload
MMDB ID: 171444
PDB Deposition Date: 2018/5/16
Updated in MMDB: 2022/11
Experimental Method:
electron microscopy
Resolution: 3.4  Å
Source Organism:
Similar Structures:
Biological Unit for 5ZWM: 57-meric; determined by author
Molecular Components in 5ZWM
Label Count Molecule
Proteins (52 molecules)
1
Pre-mrna-splicing Factor 8
Molecule annotation
1
U4/u6 Small Nuclear Ribonucleoprotein Prp4
Molecule annotation
1
Pre-mrna-processing Factor 31
Molecule annotation
1
Pre-mrna-splicing Factor 6
Molecule annotation
1
U4/u6 Small Nuclear Ribonucleoprotein Prp3
Molecule annotation
1
Spliceosomal Protein Dib1
Molecule annotation
1
13 KDA Ribonucleoprotein-associated Protein
Molecule annotation
1
Pre-mrna-splicing Factor Snu114
Molecule annotation
1
U6 Snrna-associated Sm-like Protein Lsm8
Molecule annotation
1
U6 Snrna-associated Sm-like Protein Lsm2
Molecule annotation
1
U6 Snrna-associated Sm-like Protein Lsm3
Molecule annotation
1
U6 Snrna-associated Sm-like Protein Lsm6
Molecule annotation
1
U6 Snrna-associated Sm-like Protein Lsm5
Molecule annotation
1
U6 Snrna-associated Sm-like Protein Lsm7
Molecule annotation
1
U6 Snrna-associated Sm-like Protein Lsm4
Molecule annotation
1
66 KDA U4/u6.u5 Small Nuclear Ribonucleoprotein Component
Molecule annotation
3
Small Nuclear Ribonucleoprotein SM D3
Molecule annotation
3
Small Nuclear Ribonucleoprotein-associated Protein B
Molecule annotation
3
Small Nuclear Ribonucleoprotein SM D1
Molecule annotation
3
Small Nuclear Ribonucleoprotein SM D2
Molecule annotation
3
Small Nuclear Ribonucleoprotein E
Molecule annotation
3
Small Nuclear Ribonucleoprotein F
Molecule annotation
3
Small Nuclear Ribonucleoprotein G
Molecule annotation
1
Pre-mrna-splicing Helicase Brr2
Molecule annotation
1
U2 Small Nuclear Ribonucleoprotein A'
Molecule annotation
1
U2 Small Nuclear Ribonucleoprotein B''
Molecule annotation
1
U2 Snrnp Component Hsh155
Molecule annotation
1
Cold Sensitive U2 Snrna Suppressor 1
Molecule annotation
1
Pre-mrna-splicing Factor Rse1
Molecule annotation
1
Protein Hsh49
Molecule annotation
1
Pre-mrna-splicing Factor Rds3
Molecule annotation
1
Rds3 Complex Subunit 10
Molecule annotation
1
U2 Snrnp Component Ist3
Molecule annotation
1
Pre-mrna-splicing Factor Cwc26
Molecule annotation
1
Pre-mrna Leakage Protein 1
Molecule annotation
1
Pre-mrna-splicing Factor Prp9
Molecule annotation
1
Pre-mrna-splicing Factor Prp21
Molecule annotation
1
Pre-mrna-splicing Factor Prp11
Molecule annotation
Nucleotides(5 molecules)
1
U6 Snrna
Molecule annotation
1
U4 Snrna
Molecule annotation
1
U5 Snrna
Molecule annotation
1
Pre-mrna-bps
Molecule annotation
1
U2 Snrna
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
GUANOSINE-5'-TRIPHOSPHATE (Link to PubChem not yet available)GUANOSINE-5'-TRIPHOSPHATE
1
MAGNESIUM ION (Link to PubChem not yet available)MAGNESIUM ION
6
ZINC ION (Link to PubChem not yet available)ZINC ION
* Click molecule labels to explore molecular sequence information.

Citing MMDB