6A57: Structure of histone demethylase REF6 complexed with DNA

PDB ID: 6A57Download
MMDB ID: 176668
PDB Deposition Date: 2018/6/22
Updated in MMDB: 2020/07
Experimental Method:
x-ray diffraction
Resolution: 2.7  Å
Source Organism:
Similar Structures:
Biological Unit for 6A57: hexameric; determined by author and by software (PISA)
Molecular Components in 6A57
Label Count Molecule
Proteins (2 molecules)
2
Lysine-specific Demethylase Ref6
(Gene symbol: REF6)
Molecule annotation
Nucleotides(4 molecules)
2
DNA (5'-d(*cp*tp*tp*tp*cp*tp*cp*tp*gp*tp*tp*tp*tp*gp*tp*c)-3')
Molecule annotation
2
DNA (5'-d(*gp*gp*ap*cp*ap*ap*ap*ap*cp*ap*gp*ap*gp*ap*ap*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
8
ZINC IONZINC ION
2
4
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303