National Center for
Biotechnology Information

6DBR: Cryo-EM structure of RAG in complex with one melted RSS and one unmelted RSS

PDB ID:

MMDB ID:

164929

PDB Deposition Date:

2018/5/3

Updated in MMDB:

2019/12

Experimental Method:

electron microscopy

Resolution:

4 Å

Source Organism:

synthetic construct▼

Taxonomy	Molecule
synthetic construct	A, C
Danio rerio	B, D, E, F, G, H

Similar Structures:

Biological Unit for 6DBR: octameric; determined by author

Molecular Components in 6DBR
Label	Count	Molecule
Proteins (4 molecules)
A C	2	Recombination Activating Gene 1 - MBP Chimera
B D	2	Recombination Activating Gene 2
Nucleotides(4 molecules)
E	1	Forward Strand of Unmelted RSS Substrate DNA
F	1	Reverse Strand of Unmelted RSS Substrate DNA
G	1	Forward Strand of Melted RSS Substrate DNA
H	1	Reverse Strand of Melted RSS Substrate DNA
Chemicals and Non-standard biopolymers (6 molecules)
1	2	ZINC ION
2	4	CALCIUM ION

* Click molecule labels to explore molecular sequence information.

Citing MMDB