6DBT: Cryo-EM structure of RAG in complex with 12-RSS and 23-RSS substrate DNAs

PDB ID: 6DBTDownload
MMDB ID: 164930
PDB Deposition Date: 2018/5/3
Updated in MMDB: 2019/12
Experimental Method:
electron microscopy
Resolution: 4.3  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 6DBT: octameric; determined by author
Molecular Components in 6DBT
Label Count Molecule
Proteins (4 molecules)
2
Recombination Activating Gene 1 - MBP Chimera
Molecule annotation
2
Recombination Activating Gene 2
Molecule annotation
Nucleotides(4 molecules)
1
Forward Strand of 12-rss Substrate DNA
Molecule annotation
1
Reverse Strand of 12-rss Substrate DNA
Molecule annotation
1
Forward Strand of 23-rss Substrate DNA
Molecule annotation
1
Reverse Strand of 23-rss Substrate DNA
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
2
ZINC IONZINC ION
2
4
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303