6DMV: Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Soaked for 40 s in 2 mM Mg2+ and 200 mM K+ at 21 C

PDB ID: 6DMVDownload
MMDB ID: 165706
PDB Deposition Date: 2018/6/5
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 1.52  Å
Source Organism:
Halalkalibacterium halodurans C-125▼
Similar Structures:
Biological Unit for 6DMV: tetrameric; determined by author
Molecular Components in 6DMV
Label Count Molecule
Protein (1 molecule)
1
Ribonuclease H
Molecule annotation
Nucleotides(3 molecules)
1
RNA (5'-r(*ap*cp*ap*u)-3')
Molecule annotation
1
RNA (5'-r(p*cp*g)-3')
Molecule annotation
1
DNA (5'-d(*cp*gp*ap*tp*gp*t)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
2
MAGNESIUM IONMAGNESIUM ION
2
2
POTASSIUM IONPOTASSIUM ION
3
4
IODIDE IONIODIDE ION
4
4
GLYCEROLGLYCEROL
5
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303