6EM3: State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes

PDB ID: 6EM3Download
MMDB ID: 157840
PDB Deposition Date: 2017/10/1
Updated in MMDB: 2022/11
Experimental Method:
electron microscopy
Resolution: 3.2  Å
Source Organism:
Similar Structures:
Molecular Components in 6EM3
Label Count Molecule
Proteins (30 molecules)
1
Ribosome Production Factor 1
(Gene symbol: RPF1)
Molecule annotation
1
60S Ribosomal Protein L7-a
(Gene symbol: RPL7A)
Molecule annotation
1
Protein Mak16
(Gene symbol: MAK16)
Molecule annotation
1
Ribosomal RNA-processing Protein 1
(Gene symbol: RRP1)
Molecule annotation
1
Ribosome Biogenesis Protein Nsa1
(Gene symbol: NSA1)
Molecule annotation
1
Ribosome Biogenesis Protein Brx1
(Gene symbol: BRX1)
Molecule annotation
1
rRNA-processing Protein Ebp2
(Gene symbol: EBP2)
Molecule annotation
1
Nucleolar Protein 16
(Gene symbol: NOP16)
Molecule annotation
1
60S Ribosomal Protein L4-a
(Gene symbol: RPL4A)
Molecule annotation
1
60S Ribosomal Protein L32
(Gene symbol: RPL32)
Molecule annotation
1
60S Ribosomal Protein L6-a
(Gene symbol: RPL6A)
Molecule annotation
1
60S Ribosomal Protein L33-a
(Gene symbol: RPL33A)
Molecule annotation
1
60S Ribosomal Protein L8-a
(Gene symbol: RPL8A)
Molecule annotation
1
60S Ribosomal Protein L35-a
(Gene symbol: RPL35A)
Molecule annotation
1
60S Ribosomal Protein L36-b
(Gene symbol: RPL36B)
Molecule annotation
1
60S Ribosomal Protein L37-a
(Gene symbol: RPL37A)
Molecule annotation
1
60S Ribosomal Protein L13-a
(Gene symbol: RPL13A)
Molecule annotation
1
60S Ribosomal Protein L14-a
(Gene symbol: RPL14A)
Molecule annotation
1
60S Ribosomal Protein L15-a
(Gene symbol: RPL15A)
Molecule annotation
1
60S Ribosomal Protein L16-a
(Gene symbol: RPL16A)
Molecule annotation
1
60S Ribosomal Protein L17-a
(Gene symbol: RPL17A)
Molecule annotation
1
60S Ribosomal Protein L18-a
(Gene symbol: RPL18A)
Molecule annotation
1
60S Ribosomal Protein L20-a
(Gene symbol: RPL20B)
Molecule annotation
1
60S Ribosomal Protein L26-a
(Gene symbol: RPL26A)
Molecule annotation
1
Atp-dependent RNA Helicase Has1
(Gene symbol: HAS1)
Molecule annotation
1
Proteasome-interacting Protein Cic1
(Gene symbol: CIC1)
Molecule annotation
1
Pescadillo Homolog
(Gene symbol: NOP7)
Molecule annotation
1
Ribosome Biogenesis Protein 15
(Gene symbol: NOP15)
Molecule annotation
1
Ribosome Biogenesis Protein Rlp7
(Gene symbol: RLP7)
Molecule annotation
1
Ribosome Biogenesis Protein Erb1
(Gene symbol: ERB1)
Molecule annotation
Nucleotides(3 molecules)
1
25S Ribosomal RNA
Molecule annotation
1
5.8s Ribosomal RNA
Molecule annotation
1
5.8s Ribosomal RNA
Molecule annotation
* Click molecule labels to explore molecular sequence information.

Citing MMDB