6IUD: Structure of Helicobacter pylori Soj-ADP complex bound to DNA

PDB ID: 6IUDDownload
MMDB ID: 172272
PDB Deposition Date: 2018/11/28
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 2.506  Å
Source Organism:
Helicobacter pylori 26695▼
Similar Structures:
Biological Unit for 6IUD: hexameric; determined by author
Molecular Components in 6IUD
Label Count Molecule
Proteins (4 molecules)
4
Spooj Regulator (Soj)
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(p*tp*cp*cp*cp*tp*gp*tp*tp*tp*cp*ap*cp*gp*tp*gp*gp*ap*ap*cp*ap*cp*cp*cp*t)-3')
Molecule annotation
1
DNA (5'-d(p*ap*gp*gp*gp*tp*gp*tp*tp*cp*cp*ap*cp*gp*tp*gp*ap*ap*ap*cp*ap*gp*gp*gp*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
4
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
2
4
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303