6LQQ: Cryo-EM structure of 90S small subunit preribosomes in transition states (State B)

PDB ID: 6LQQDownload
MMDB ID: 192576
PDB Deposition Date: 2020/1/14
Updated in MMDB: 2024/04
Experimental Method:
electron microscopy
Resolution: 4.1  Å
Source Organism:
Similar Structures:
Biological Unit for 6LQQ: 70-meric; determined by author
Molecular Components in 6LQQ
Label Count Molecule
Proteins (67 molecules)
1
40S Ribosomal Protein S1-a
Molecule annotation
1
40S Ribosomal Protein S4-a
Molecule annotation
1
40S Ribosomal Protein S5
Molecule annotation
1
40S Ribosomal Protein S6-a
Molecule annotation
1
40S Ribosomal Protein S7-a
Molecule annotation
1
40S Ribosomal Protein S8-a
Molecule annotation
1
40S Ribosomal Protein S9-a
Molecule annotation
1
40S Ribosomal Protein S11-a
Molecule annotation
1
40S Ribosomal Protein S13
Molecule annotation
1
40S Ribosomal Protein S14-a
Molecule annotation
1
40S Ribosomal Protein S16-a
Molecule annotation
1
40S Ribosomal Protein S22-b
Molecule annotation
1
40S Ribosomal Protein S23-a
Molecule annotation
1
40S Ribosomal Protein S24-a
Molecule annotation
1
40S Ribosomal Protein S27-a
Molecule annotation
1
40S Ribosomal Protein S28-a
Molecule annotation
2
rRNA 2'-o-methyltransferase Fibrillarin
Molecule annotation
1
Nucleolar Protein 56
Molecule annotation
1
Nucleolar Protein 58
Molecule annotation
1
Ribosomal RNA-processing Protein 9
Molecule annotation
2
13 KDA Ribonucleoprotein-associated Protein
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 4
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 5
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 8
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 9
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 10
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 15
Molecule annotation
1
Net1-associated Nuclear Protein 1
Molecule annotation
1
Periodic Tryptophan Protein 2
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 12
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 13
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 18
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 21
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 6
Molecule annotation
1
BUD Site Selection Protein 21
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 7
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 11
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein Mpp10
Molecule annotation
1
U3 Small Nucleolar Ribonucleoprotein Protein Imp3
Molecule annotation
1
U3 Small Nucleolar Ribonucleoprotein Protein Imp4
Molecule annotation
1
Something About Silencing Protein 10
Molecule annotation
1
Protein Sof1
Molecule annotation
1
rRNA-processing Protein Fcf2
Molecule annotation
1
rRNA-processing Protein Fcf1
Molecule annotation
1
Ribosome Biogenesis Protein Enp2
Molecule annotation
1
U3 Small Nucleolar Ribonucleoprotein Protein Lcp5
Molecule annotation
1
Krr1 Small Subunit Processome Component
Molecule annotation
1
rRNA Biogenesis Protein Rrp5
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 22
Molecule annotation
1
Ribosomal RNA-processing Protein 7
Molecule annotation
2
Ribosomal RNA Small Subunit Methyltransferase Nep1
Molecule annotation
1
Ribosome Biogenesis Protein Bms1
Molecule annotation
1
RNA 3'-terminal Phosphate Cyclase-like Protein
Molecule annotation
2
RNA Cytidine Acetyltransferase
Molecule annotation
1
Nucleolar Complex Protein 14
Molecule annotation
1
Nucleolar Complex Protein 4
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 20
Molecule annotation
1
U3 Small Nucleolar RNA-associated Protein 14
Molecule annotation
1
Essential Nuclear Protein 1
Molecule annotation
1
Pno1
Molecule annotation
1
Protein Faf1
Molecule annotation
1
Protein Bfr2
Molecule annotation
1
Unassigned Helices
Molecule annotation
Nucleotides(3 molecules)
1
U3 Snorna
Molecule annotation
1
5' ETS
Molecule annotation
1
18S Pre-rrna
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
2
1
1
* Click molecule labels to explore molecular sequence information.

Citing MMDB