6N8J: Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunit

PDB ID: 6N8JDownload
MMDB ID: 175028
PDB Deposition Date: 2018/11/29
Updated in MMDB: 2022/11
Experimental Method:
electron microscopy
Resolution: 3.5  Å
Source Organism:
Similar Structures:
Biological Unit for 6N8J: 49-meric; determined by author
Molecular Components in 6N8J
Label Count Molecule
Proteins (46 molecules)
1
60S Ribosomal Protein L5
(Gene symbol: RPL5)
Molecule annotation
1
60S Ribosomal Protein L11-a
Molecule annotation
1
60S Ribosomal Protein L2-a
Molecule annotation
1
60S Ribosomal Protein L28
Molecule annotation
1
60S Ribosomal Protein L3
Molecule annotation
1
Nucleolar Gtp-binding Protein 1
Molecule annotation
1
60S Ribosomal Protein L4-a
Molecule annotation
1
60S Ribosomal Protein L30
Molecule annotation
1
60S Ribosomal Protein L31-a
Molecule annotation
1
60S Ribosomal Protein L6-a
Molecule annotation
1
60S Ribosomal Protein L32
Molecule annotation
1
60S Ribosomal Protein L7-a
Molecule annotation
1
60S Ribosomal Protein L33-a
Molecule annotation
1
60S Ribosomal Protein L8-a
Molecule annotation
1
60S Ribosomal Protein L34-a
Molecule annotation
1
BUD Site Selection Protein 20
Molecule annotation
1
60S Ribosomal Protein L9-a
Molecule annotation
1
60S Ribosomal Protein L35-a
Molecule annotation
1
60S Ribosomal Protein L36-a
Molecule annotation
1
60S Ribosomal Protein L37-a
Molecule annotation
1
60S Ribosomal Protein L38
Molecule annotation
1
Nucleolar Gtp-binding Protein 2
Molecule annotation
1
60S Ribosomal Protein L13-a
Molecule annotation
1
60S Ribosomal Protein L39
Molecule annotation
1
60S Ribosomal Protein L14-a
Molecule annotation
1
60S Ribosomal Protein L43-a
Molecule annotation
1
60S Ribosomal Protein L15-a
Molecule annotation
1
Ribosome Biogenesis Protein Rlp24
Molecule annotation
1
60S Ribosomal Protein L16-a
Molecule annotation
1
60S Ribosomal Protein L17-a
Molecule annotation
1
60S Ribosomal Protein L18-a
Molecule annotation
1
60S Ribosomal Protein L19-a
Molecule annotation
1
Ribosome Biogenesis Protein Nsa2
Molecule annotation
1
60S Ribosomal Protein L20-a
Molecule annotation
1
60S Ribosomal Protein L21-a
Molecule annotation
1
60S Ribosomal Protein L22-a
Molecule annotation
1
60S Ribosomal Protein L23-a
Molecule annotation
1
Ribosome Assembly Factor Mrt4
Molecule annotation
1
60S Ribosomal Protein L25
Molecule annotation
1
60S Ribosomal Protein L26-a
Molecule annotation
1
Eukaryotic Translation Initiation Factor 6
Molecule annotation
1
60S Ribosomal Protein L27-a
Molecule annotation
1
Upf0642 Protein Ybl028c
Molecule annotation
1
60S Ribosomal Protein L12
Molecule annotation
1
60S Ribosomal Protein L42-a
Molecule annotation
1
60S Ribosomal Protein L29
Molecule annotation
Nucleotides(3 molecules)
1
Saccharomyces Cerevisiae S288c 35S Pre-ribosomal RNA (Rdn37-1), Miscrna
Molecule annotation
1
5S rRNA
Molecule annotation
1
5.8s rRNA
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
2
GUANOSINE-5'-TRIPHOSPHATE (Link to PubChem not yet available)GUANOSINE-5'-TRIPHOSPHATE
2
MAGNESIUM ION (Link to PubChem not yet available)MAGNESIUM ION
* Click molecule labels to explore molecular sequence information.

Citing MMDB