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6OBJ:
Structure of a DNA-bound dimer extracted from filamentous SgrAI endonuclease in its activated form
PDB ID:
6OBJ
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MMDB ID:
184592
PDB Deposition Date:
2019/3/20
Updated in MMDB:
2020/09
Experimental Method:
electron microscopy
Resolution:
3.5 Å
Source Organism:
Streptomyces griseus
Similar Structures:
VAST+
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Biological Unit for 6OBJ: 40-meric
Molecular Components in 6OBJ
Label
Count
Molecule
Proteins (20 molecules)
A
B
A_1
A_2
A_3
A_4
A_5
A_6
A_7
A_8
A_9
B_1
B_2
B_3
B_4
B_5
B_6
B_7
B_8
B_9
20
Sgrair Restriction Enzyme
Nucleotides(20 molecules)
C
D
C_1
C_2
C_3
C_4
C_5
C_6
C_7
C_8
C_9
D_1
D_2
D_3
D_4
D_5
D_6
D_7
D_8
D_9
20
DNA (26-mer)
Chemicals and Non-standard biopolymers (20 molecules)
1
20
MAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303