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6R1U:
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 2
PDB ID:
6R1U
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MMDB ID:
174746
PDB Deposition Date:
2019/3/15
Updated in MMDB:
2019/10
Experimental Method:
electron microscopy
Resolution:
4.36 Å
Source Organism:
synthetic construct
▼
Taxonomy
Molecule
synthetic construct
I, J
Homo sapiens
K, L
Xenopus laevis
A, B, C, D, E, F, G, H, M
Similar Structures:
VAST+
Download sequence data
Biological Unit for 6R1U: tridecameric; determined by author and by software (PISA)
Molecular Components in 6R1U
Label
Count
Molecule
Proteins (11 molecules)
A
E
2
Histone H3.2
B
F
2
Histone H4
C
G
2
Histone H2A
D
H
2
Histone H2B 1.1
K
1
Lysine-specific Histone Demethylase 1B
L
1
Putative Oxidoreductase Glyr1
M
1
Histone H3
Nucleotides(2 molecules)
I
1
DNA (147-mer)
J
1
DNA (147-mer)
Chemicals and Non-standard biopolymers (4 molecules)
1
1
FLAVIN-ADENINE DINUCLEOTIDE
2
3
ZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303