6R25: Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 3

PDB ID: 6R25Download
MMDB ID: 174747
PDB Deposition Date: 2019/3/15
Updated in MMDB: 2019/04
Experimental Method:
electron microscopy
Resolution: 4.61  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 6R25: tridecameric; determined by author and by software (PISA)
Molecular Components in 6R25
Label Count Molecule
Proteins (11 molecules)
1
Lysine-specific Histone Demethylase 1B
Molecule annotation
1
Npac
Molecule annotation
1
Histone H3
Molecule annotation
2
Histone H3
Molecule annotation
2
H4
Molecule annotation
2
Histone H2A
Molecule annotation
2
H2B
Molecule annotation
Nucleotides(2 molecules)
1
DNA (147-mer)
Molecule annotation
1
DNA (147-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
1
FLAVIN-ADENINE DINUCLEOTIDEFLAVIN-ADENINE DINUCLEOTIDE
2
3
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303