NCBI
National Center for
Biotechnology Information
Search
6RM3:
Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome
PDB ID:
6RM3
Download
MMDB ID:
192651
PDB Deposition Date:
2019/5/5
Updated in MMDB:
2024/07
Experimental Method:
electron microscopy
Resolution:
3.4 Å
Source Organism:
Vairimorpha necatrix
Similar Structures:
VAST+
Download sequence data
Biological Unit for 6RM3: 78-meric; determined by author
Molecular Components in 6RM3
Label
Count
Molecule
Proteins (75 molecules)
LA0
1
UL2
SA0
1
US2
LAA
1
Ul15
SAA
1
Es26
LB0
1
UL3
SB0
1
ES1
LBB
1
El29
SBB
1
Es27
LC0
1
UL4
SC0
1
US5
LCC
1
El30
SCC
1
Es28
LD0
1
Ul18
SD0
1
US3
LDD
1
El31
SDD
1
Us14
LE0
1
EL6
SE0
1
ES4
LEE
1
El32
SEE
1
Es30
LF0
1
Ul30
SF0
1
US7
LFF
1
El33
SFF
1
Es31
LG0
1
EL8
SG0
1
ES6
LGG
1
El34
SGG
1
Rack1
LH0
1
UL6
SH0
1
ES7
LHH
1
Ul29
LI0
1
Ul16
SI0
1
ES8
LII
1
El36
LJ0
1
UL5
SJ0
1
US4
LJJ
1
El37
LL0
1
El13
SL0
1
Us17
LLL
1
El39
LM0
1
El14
LMM
1
El40
SM0
1
Es12
LN0
1
El15
SN0
1
Us15
LNN
1
Mdf2
SNN
1
Mdf1
LO0
1
Ul13
SO0
1
Us11
LOO
1
El42
LP0
1
Ul22
SP0
1
Us19
LPP
1
El43
LQ0
1
El18
SQ0
1
US9
LR0
1
El19
SR0
1
Es17
LS0
1
El20
SS0
1
Us13
LT0
1
El21
ST0
1
Es19
LU0
1
El22
SU0
1
Us10
LV0
1
Ul14
SV0
1
Es21
LW0
1
El24
SW0
1
US8
LX0
1
Ul23
SX0
1
Us12
LXX
1
Msl1
LY0
1
Ul24
SY0
1
Es24
LZ0
1
El27
SZ0
1
Es25
SK0
1
Es10
Nucleotides(3 molecules)
S60
1
16S rRNA
L70
1
5S rRNA
L50
1
23S rRNA
Chemicals and Non-standard biopolymers (183 molecules)
1
174
MAGNESIUM ION
2
9
ZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303