6T0B: The III2-IV(5B)2 respiratory supercomplex from S. cerevisiae

PDB ID: 6T0BDownload
MMDB ID: 186746
PDB Deposition Date: 2019/10/2
Updated in MMDB: 2022/11
Experimental Method:
electron microscopy
Resolution: 2.8  Å
Source Organism:
Similar Structures:
Biological Unit for 6T0B: 46-meric; determined by author
Molecular Components in 6T0B
Label Count Molecule
Proteins (46 molecules)
2
Cytochrome B-c1 Complex Subunit 1, Mitochondrial
(Gene symbol: COR1)
Molecule annotation
2
Cytochrome B-c1 Complex Subunit 2, Mitochondrial
(Gene symbol: QCR2)
Molecule annotation
2
Cytochrome B
(Gene symbol: COB)
Molecule annotation
2
Cytochrome C1, Heme Protein, Mitochondrial
(Gene symbol: CYT1)
Molecule annotation
2
Cytochrome B-c1 Complex Subunit Rieske, Mitochondrial
(Gene symbol: RIP1)
Molecule annotation
2
Cytochrome B-c1 Complex Subunit 6
(Gene symbol: QCR6)
Molecule annotation
2
Cytochrome B-c1 Complex Subunit 7
(Gene symbol: QCR7)
Molecule annotation
2
Cytochrome B-c1 Complex Subunit 8
(Gene symbol: QCR8)
Molecule annotation
2
Cytochrome B-c1 Complex Subunit 9
(Gene symbol: QCR9)
Molecule annotation
2
Cytochrome B-c1 Complex Subunit 10
(Gene symbol: QCR10)
Molecule annotation
2
Cytochrome C Oxidase Subunit 1
(Gene symbol: COX1)
Molecule annotation
2
Cytochrome C Oxidase Subunit 2
(Gene symbol: COX2)
Molecule annotation
2
Cytochrome C Oxidase Subunit 3
(Gene symbol: COX3)
Molecule annotation
2
Cytochrome C Oxidase Subunit 4, Mitochondrial
(Gene symbol: COX4)
Molecule annotation
2
Cytochrome C Oxidase Polypeptide 5B, Mitochondrial
(Gene symbol: COX5B)
Molecule annotation
2
Cytochrome C Oxidase Subunit 6, Mitochondrial
(Gene symbol: COX6)
Molecule annotation
2
Cytochrome C Oxidase Subunit 7
(Gene symbol: COX7)
Molecule annotation
2
Cytochrome C Oxidase Polypeptide Viii, Mitochondrial
(Gene symbol: COX8)
Molecule annotation
2
Cytochrome C Oxidase Subunit 7A
(Gene symbol: COX9)
Molecule annotation
2
Cytochrome C Oxidase Subunit 6B
(Gene symbol: COX12)
Molecule annotation
2
Cytochrome C Oxidase Subunit 6A, Mitochondrial
(Gene symbol: COX13)
Molecule annotation
2
Cox26
(Gene symbol: COX26)
Molecule annotation
2
Respiratory Supercomplex Factor 2, Mitochondrial
(Gene symbol: RCF2)
Molecule annotation
Chemicals and Non-standard biopolymers (63 molecules)
1
8
CARDIOLIPINCARDIOLIPIN
2
26
DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINEDI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
3
4
PROTOPORPHYRIN IX CONTAINING FEPROTOPORPHYRIN IX CONTAINING FE
4
7
1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE
5
2
HEME CHEME C
6
2
FE2/S2 (INORGANIC) CLUSTERFE2/S2 (INORGANIC) CLUSTER
7
2
COPPER (II) IONCOPPER (II) ION
8
4
HEME-AHEME-A
9
2
CALCIUM IONCALCIUM ION
10
2
MAGNESIUM IONMAGNESIUM ION
11
2
DINUCLEAR COPPER IONDINUCLEAR COPPER ION
12
2
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303