National Center for
Biotechnology Information

6TPQ: RNase M5 bound to 50S ribosome with precursor 5S rRNA

PDB ID:

MMDB ID:

193416

PDB Deposition Date:

2019/12/13

Updated in MMDB:

2022/11

Experimental Method:

electron microscopy

Resolution:

3.07 Å

Source Organism:

Bacillus subtilis subsp. subtilis str. 168▼

Taxonomy	Molecule
Bacillus subtilis subsp. subtilis str. 168	V, b, U, W, X, Y, Z, a, c, d, e, f, g, h, i, j, k, l, m, n, o, p, q, r, s, t, u, v, w
Geobacillus stearothermophilus	B, A

Similar Structures:

Biological Unit for 6TPQ: 31-meric; determined by author

Molecular Components in 6TPQ
Label	Count	Molecule
Proteins (29 molecules)
B A	2	Ribonuclease M5
b	1	50S Ribosomal Protein L10
W	1	50S Ribosomal Protein L2
X	1	50S Ribosomal Protein L3
Y	1	50S Ribosomal Protein L4
Z	1	50S Ribosomal Protein L5
a	1	50S Ribosomal Protein L6
c	1	50S Ribosomal Protein L13
d	1	50S Ribosomal Protein L14
e	1	50S Ribosomal Protein L15
f	1	50S Ribosomal Protein L16
g	1	50S Ribosomal Protein L17
h	1	50S Ribosomal Protein L18
i	1	50S Ribosomal Protein L19
j	1	50S Ribosomal Protein L20
k	1	50S Ribosomal Protein L21
l	1	50S Ribosomal Protein L22
m	1	50S Ribosomal Protein L23
n	1	50S Ribosomal Protein L24
o	1	50S Ribosomal Protein L27
p	1	50S Ribosomal Protein L32
q	1	50S Ribosomal Protein L33 1
r	1	50S Ribosomal Protein L34
s	1	50S Ribosomal Protein L35
t	1	50S Ribosomal Protein L36
u	1	50S Ribosomal Protein L28
v	1	50S Ribosomal Protein L29
w	1	50S Ribosomal Protein L30
Nucleotides(2 molecules)
V	1	Pre-5s rRNA
U	1	Pre-23s rRNA
Chemicals and Non-standard biopolymers (222 molecules)
1	219	MAGNESIUM ION
2	3	ZINC ION

* Click molecule labels to explore molecular sequence information.

Citing MMDB