6W9D: RNF12 RING domain in complex with a Ube2d2~Ub conjugate

PDB ID: 6W9DDownload
MMDB ID: 187835
PDB Deposition Date: 2020/3/22
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 3.19  Å
Source Organism:
Similar Structures:
Biological Unit for 6W9D: trimeric; determined by author
Molecular Components in 6W9D
Label Count Molecule
Proteins (3 molecules)
1
Ubiquitin-conjugating Enzyme E2 D2
(Gene symbol: UBE2D2)
Molecule annotation
1
E3 Ubiquitin-protein Ligase Rlim
(Gene symbol: RLIM)
Molecule annotation
1
Ubiquitin
(Gene symbol: UBC)
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
2
ZINC IONZINC ION
2
2
IODIDE IONIODIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303