6WEA: YTH domain of human YTHDC1 with a 10mer Oligo Containing N6mA

PDB ID: 6WEADownload
MMDB ID: 190152
PDB Deposition Date: 2020/4/1
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.8  Å
Source Organism:
Similar Structures:
Biological Unit for 6WEA: dimeric; determined by author and by software (PISA)
Molecular Components in 6WEA
Label Count Molecule
Protein (1 molecule)
1
YTH Domain-containing Protein 1
(Gene symbol: YTHDC1)
Molecule annotation
Nucleotide(1 molecule)
1
DNA (5'-d(*cp*gp*cp*gp*gp*(6ma)p*cp*tp*tp*c)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
7
1,2-ETHANEDIOL1,2-ETHANEDIOL
2
6
SULFATE IONSULFATE ION
3
1
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303