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6WEA:
YTH domain of human YTHDC1 with a 10mer Oligo Containing N6mA
PDB ID:
6WEA
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MMDB ID:
190152
PDB Deposition Date:
2020/4/1
Updated in MMDB:
2023/10
Experimental Method:
x-ray diffraction
Resolution:
1.8 Å
Source Organism:
Homo sapiens
Similar Structures:
VAST+
Download sequence data
Biological Unit for 6WEA: dimeric; determined by author and by software (PISA)
Molecular Components in 6WEA
Label
Count
Molecule
Protein (1 molecule)
A
1
YTH Domain-containing Protein 1
(Gene symbol:
YTHDC1
)
Nucleotide(1 molecule)
E
1
DNA (5'-d(*cp*gp*cp*gp*gp*(6ma)p*cp*tp*tp*c)-3')
Chemicals and Non-standard biopolymers (14 molecules)
1
7
1,2-ETHANEDIOL
2
6
SULFATE ION
3
1
SODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303