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6Y53:
human 17S U2 snRNP low resolution part
PDB ID:
6Y53
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MMDB ID:
189121
PDB Deposition Date:
2020/2/24
Updated in MMDB:
2022/11
Experimental Method:
electron microscopy
Resolution:
7.1 Å
Source Organism:
Homo sapiens
Similar Structures:
VAST+
Download sequence data
Molecular Components in 6Y53
Label
Count
Molecule
Proteins (18 molecules)
a
1
U2 Small Nuclear Ribonucleoprotein A'
(Gene symbol:
SNRPA1
)
b
1
U2 Small Nuclear Ribonucleoprotein B''
(Gene symbol:
SNRPB2
)
z
1
Splicing Factor 3B Subunit 6
(Gene symbol:
SF3B6
)
p
1
Probable Atp-dependent RNA Helicase Ddx46
(Gene symbol:
DDX46
)
6
1
Splicing Factor 3A Subunit 1
(Gene symbol:
SF3A1
)
7
1
Splicing Factor 3A Subunit 2
(Gene symbol:
SF3A2
)
9
1
Splicing Factor 3A Subunit 3
(Gene symbol:
SF3A3
)
o
1
Splicing Factor 3B Subunit 4
(Gene symbol:
SF3B4
)
m
1
Small Nuclear Ribonucleoprotein-associated Proteins B and B'
(Gene symbol:
SNRPB
)
k
1
Small Nuclear Ribonucleoprotein G
(Gene symbol:
SNRPG
)
n
1
Small Nuclear Ribonucleoprotein SM D1
(Gene symbol:
SNRPD1
)
h
1
Small Nuclear Ribonucleoprotein SM D2
(Gene symbol:
SNRPD2
)
l
1
Small Nuclear Ribonucleoprotein SM D3
(Gene symbol:
SNRPD3
)
j
1
Small Nuclear Ribonucleoprotein E
(Gene symbol:
SNRPE
)
i
1
Small Nuclear Ribonucleoprotein F
(Gene symbol:
SNRPF
)
q
1
HIV Tat-specific Factor 1
(Gene symbol:
HTATSF1
)
8
1
Splicing Factor 3B Subunit 2
(Gene symbol:
SF3B2
)
u
1
Splicing Factor 3B Subunit 1
(Gene symbol:
SF3B1
)
Nucleotide(1 molecule)
2
1
U2 Snrna
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303