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7O9M: Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU module

PDB ID:	7O9M Download
MMDB ID:	203895
PDB Deposition Date:	2021/4/16
Updated in MMDB:	2021/07
Experimental Method:	electron microscopy
Resolution:	2.6 Å
Source Organism:	Homo sapiens
Similar Structures:

Biological Unit for 7O9M: 66-meric; determined by author

Molecular Components in 7O9M
Label	Count	Molecule
Proteins (64 molecules)
C	1	Mitochondrial Ribosome-associated Gtpase 1
D	1	39S Ribosomal Protein L2, Mitochondrial
E	1	39S Ribosomal Protein L3, Mitochondrial
F	1	39S Ribosomal Protein L4, Mitochondrial
H	1	39S Ribosomal Protein L9, Mitochondrial
I	1	39S Ribosomal Protein L10, Mitochondrial
J	1	39S Ribosomal Protein L11, Mitochondrial
K	1	39S Ribosomal Protein L13, Mitochondrial
L	1	39S Ribosomal Protein L14, Mitochondrial
M	1	39S Ribosomal Protein L15, Mitochondrial
N	1	39S Ribosomal Protein L16, Mitochondrial
O	1	39S Ribosomal Protein L17, Mitochondrial
P	1	Mitochondrial Ribosomal Protein L18, Isoform Cra_b
Q	1	39S Ribosomal Protein L19, Mitochondrial
R	1	39S Ribosomal Protein L20, Mitochondrial
S	1	39S Ribosomal Protein L21, Mitochondrial
T	1	39S Ribosomal Protein L22, Mitochondrial
U	1	39S Ribosomal Protein L23, Mitochondrial
V	1	39S Ribosomal Protein L24, Mitochondrial
W	1	39S Ribosomal Protein L27, Mitochondrial
X	1	39S Ribosomal Protein L28, Mitochondrial
Y	1	39S Ribosomal Protein L47, Mitochondrial
Z	1	39S Ribosomal Protein L30, Mitochondrial
a	1	39S Ribosomal Protein L42, Mitochondrial
0	1	39S Ribosomal Protein L32, Mitochondrial
1	1	39S Ribosomal Protein L33, Mitochondrial
2	1	39S Ribosomal Protein L34, Mitochondrial
3	1	39S Ribosomal Protein L35, Mitochondrial
4	1	39S Ribosomal Protein L36, Mitochondrial
5	1	39S Ribosomal Protein L37, Mitochondrial
6	1	39S Ribosomal Protein L38, Mitochondrial
7	1	39S Ribosomal Protein L39, Mitochondrial
8	1	39S Ribosomal Protein L40, Mitochondrial
9	1	39S Ribosomal Protein L41, Mitochondrial
b	1	39S Ribosomal Protein L43, Mitochondrial
c	1	39S Ribosomal Protein L44, Mitochondrial
d	1	39S Ribosomal Protein L45, Mitochondrial
e	1	39S Ribosomal Protein L46, Mitochondrial
f	1	39S Ribosomal Protein L48, Mitochondrial
g	1	39S Ribosomal Protein L49, Mitochondrial
h	1	39S Ribosomal Protein L50, Mitochondrial
i	1	39S Ribosomal Protein L51, Mitochondrial
j	1	39S Ribosomal Protein L52, Mitochondrial
k	1	39S Ribosomal Protein L53, Mitochondrial
l	1	39S Ribosomal Protein L54, Mitochondrial
m	1	39S Ribosomal Protein L55, Mitochondrial
o	1	Ribosomal Protein 63, Mitochondrial
p	1	Peptidyl-trna Hydrolase Ict1, Mitochondrial
q	1	Growth Arrest and DNA Damage-inducible Proteins-interacting Protein 1
r	1	39S Ribosomal Protein S18a, Mitochondrial
s	1	39S Ribosomal Protein S30, Mitochondrial
n	1	rRNA Methyltransferase 2, Mitochondrial
A1	1	5-methylcytosine rRNA Methyltransferase Nsun4
A2	1	Transcription Termination Factor 4, Mitochondrial
v	1	Mief1 Upstream Open Reading Frame Protein
u	1	Mitochondrial Assembly of Ribosomal Large Subunit Protein 1
t1 t2 t3 t4 t6 t5	6	39S Ribosomal Protein L12, Mitochondrial
w	1	Acyl Carrier Protein, Mitochondrial
UNK	1	Unknown Residues
Nucleotides(2 molecules)
A	1	16S rRNA
B	1	Mt-trnaval
Chemicals and Non-standard biopolymers (109 molecules)
1	104	MAGNESIUM ION
2	1	GUANOSINE-5'-DIPHOSPHATE
3	2	ZINC ION
4	1	S-ADENOSYLMETHIONINE
5	1	4'-PHOSPHOPANTETHEINE

* Click molecule labels to explore molecular sequence information.

Citing MMDB

Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303