7V08: Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain

PDB ID: 7V08Download
MMDB ID: 227756
PDB Deposition Date: 2022/5/10
Updated in MMDB: 2024/06
Experimental Method:
electron microscopy
Resolution: 2.36  Å
Source Organism:
Similar Structures:
Biological Unit for 7V08: 60-meric; determined by author
Molecular Components in 7V08
Label Count Molecule
Proteins (56 molecules)
1
60S Ribosomal Protein L2-a
Molecule annotation
1
rRNA-processing Protein
Molecule annotation
1
60S Ribosomal Protein L12-a
Molecule annotation
1
Ribosome Biogenesis Protein Alb1
Molecule annotation
1
60S Ribosomal Protein L3
Molecule annotation
1
60S Ribosomal Protein L4-a
Molecule annotation
1
60S Ribosomal Protein L5
Molecule annotation
1
60S Ribosomal Protein L6-a
Molecule annotation
1
60S Ribosomal Protein L7-a
Molecule annotation
1
Rpl8a Isoform 1
Molecule annotation
1
60S Ribosomal Protein L9-a
Molecule annotation
1
BUD Site Selection Protein 20
Molecule annotation
1
60S Ribosomal Protein L11-a
Molecule annotation
1
Proteasome-interacting Protein Cic1
Molecule annotation
1
60S Ribosomal Protein L13-a
Molecule annotation
1
60S Ribosomal Protein L14-a
Molecule annotation
1
60S Ribosomal Protein L15-a
Molecule annotation
1
60S Ribosomal Protein L16-a
Molecule annotation
1
60S Ribosomal Protein L17-a
Molecule annotation
1
60S Ribosomal Protein L18-a
Molecule annotation
1
60S Ribosomal Protein L19-a
Molecule annotation
1
60S Ribosomal Protein L20-a
Molecule annotation
1
60S Ribosomal Protein L21-a
Molecule annotation
1
60S Ribosomal Protein L22-a
Molecule annotation
1
60S Ribosomal Protein L23-a
Molecule annotation
1
Ribosome Assembly Factor Mrt4
Molecule annotation
1
60S Ribosomal Protein L25
Molecule annotation
1
60S Ribosomal Protein L26-a
Molecule annotation
1
60S Ribosomal Protein L27-a
Molecule annotation
1
60S Ribosomal Protein L28
Molecule annotation
1
Nucleolar Gtp-binding Protein 1
Molecule annotation
1
60S Ribosomal Protein L30
Molecule annotation
1
60S Ribosomal Protein L31-a
Molecule annotation
1
60S Ribosomal Protein L32
Molecule annotation
1
60S Ribosomal Protein L33-a
Molecule annotation
1
60S Ribosomal Protein L34-a
Molecule annotation
1
60S Ribosomal Protein L35-a
Molecule annotation
1
60S Ribosomal Protein L36-a
Molecule annotation
1
60S Ribosomal Protein L37-a
Molecule annotation
1
Rpl38 Isoform 1
Molecule annotation
1
60S Ribosomal Protein L39
Molecule annotation
1
Nucleolar Gtp-binding Protein 2
Molecule annotation
1
Pescadillo Homolog
Molecule annotation
1
Ribosome Biogenesis Protein 15
Molecule annotation
1
60S Ribosomal Protein L43-a
Molecule annotation
1
Ribosome Biogenesis Protein Nop53
Molecule annotation
1
Ribosome Biogenesis Protein Nsa2
Molecule annotation
1
Nuclear Gtp-binding Protein Nug1
Molecule annotation
1
Rlp7 Isoform 1
Molecule annotation
1
Ribosome Biogenesis Protein Rlp24
Molecule annotation
1
Ribosome Production Factor 2 Homolog
Molecule annotation
1
Ribosome Biogenesis Regulatory Protein
Molecule annotation
1
Rsa4 Isoform 1
Molecule annotation
1
Eukaryotic Translation Initiation Factor 6
Molecule annotation
1
Upf0642 Protein Ybl028c
Molecule annotation
1
Probable Metalloprotease Arx1
Molecule annotation
Nucleotides(4 molecules)
1
25S rRNA
Molecule annotation
1
5.8s rRNA
Molecule annotation
1
5S rRNA
Molecule annotation
1
Its2
Molecule annotation
Chemicals and Non-standard biopolymers (92 molecules)
81
3
5
2
1
* Click molecule labels to explore molecular sequence information.

Citing MMDB