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7XD0:
cryo-EM structure of H2BK34ub nucleosome
PDB ID:
7XD0
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MMDB ID:
216356
PDB Deposition Date:
2022/3/26
Updated in MMDB:
2022/09
Experimental Method:
electron microscopy
Resolution:
3.48 Å
Source Organism:
synthetic construct
▼
Taxonomy
Molecule
synthetic construct
H, D, I, J, L, K
Homo sapiens
F, G, E, A, C, B
Similar Structures:
VAST+
Download sequence data
Molecular Components in 7XD0
Label
Count
Molecule
Proteins (10 molecules)
F
B
2
Histone H4
G
C
2
Histone H2A
H
D
2
Histone H2B Type 1-K
E
A
2
Histone Domain-containing Protein
L
K
2
Ubiquitin-60s Ribosomal Protein L40
Nucleotides(2 molecules)
I
1
DNA (146-mer)
J
1
DNA (146-mer)
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303