7ZKP: Late assembly intermediate of the proximal proton pumping module of complex I with assembly factors NDUFAF1 and CIA84

PDB ID: 7ZKPDownload
MMDB ID: 223566
PDB Deposition Date: 2022/4/13
Updated in MMDB: 2022/12
Experimental Method:
electron microscopy
Resolution: 3.2  Å
Source Organism:
Similar Structures:
Biological Unit for 7ZKP: 14-meric; determined by author and by software (PISA)
Molecular Components in 7ZKP
Label Count Molecule
Proteins (14 molecules)
1
Subunit Nimm of Nadh:ubiquinone Oxidoreductase (Complex I)
Molecule annotation
1
Nadh-ubiquinone Oxidoreductase Chain 4L
Molecule annotation
1
Subunit Nupm of Nadh:ubiquinone Oxidoreductase (Complex I)
Molecule annotation
1
Subunit Nb6m of Nadh:ubiquinone Oxidoreductase (Complex I)
Molecule annotation
1
Nadh-ubiquinone Oxidoreductase Complex I, 21 KDA Subunit-domain-containing Protein
Molecule annotation
1
Nadh-ubiquinone Oxidoreductase Chain 1
Molecule annotation
1
Nadh Dehydrogenase Subunit 2
Molecule annotation
1
Nadh-ubiquinone Oxidoreductase Chain 3
Molecule annotation
1
Nadh-ubiquinone Oxidoreductase Chain 6
Molecule annotation
1
Subunit Ni9m of Protein Nadh:ubiquinone Oxidoreductase (Complex I)
Molecule annotation
1
Subunit Nebm of Nadh:ubiquinone Oxidoreductase (Complex I)
Molecule annotation
1
Subunit Nipm of Nadh:ubiquinone Oxidoreductase (Complex I)
Molecule annotation
1
Assembly Factor Cia84
Molecule annotation
1
Cia30 Domain-containing Protein
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
2
CARDIOLIPIN (Link to PubChem not yet available)CARDIOLIPIN
2
1
DIUNDECYL PHOSPHATIDYL CHOLINE (Link to PubChem not yet available)DIUNDECYL PHOSPHATIDYL CHOLINE
3
1
1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE (Link to PubChem not yet available)1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
4
1
1,2-Distearoyl-sn-glycerophosphoethanolamine (Link to PubChem not yet available)1,2-Distearoyl-sn-glycerophosphoethanolamine
5
1
Phosphatidylinositol (Link to PubChem not yet available)Phosphatidylinositol
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303