8CA7: Omadacycline and spectinomycin bound to the 30S ribosomal subunit head

PDB ID: 8CA7Download
MMDB ID: 233544
PDB Deposition Date: 2023/1/24
Updated in MMDB: 2023/09
Experimental Method:
electron microscopy
Resolution: 2.06  Å
Source Organism:
Similar Structures:
Biological Unit for 8CA7: nonameric; determined by author and by software (PISA)
Molecular Components in 8CA7
Label Count Molecule
Proteins (8 molecules)
1
Small Ribosomal Subunit Protein US3
Molecule annotation
1
Small Ribosomal Subunit Protein US5
Molecule annotation
1
30S Ribosomal Protein S7
Molecule annotation
1
Small Ribosomal Subunit Protein US9
Molecule annotation
1
Small Ribosomal Subunit Protein Us10
Molecule annotation
1
Small Ribosomal Subunit Protein Us13
Molecule annotation
1
Small Ribosomal Subunit Protein Us14
Molecule annotation
1
Small Ribosomal Subunit Protein Us19
Molecule annotation
Nucleotide(1 molecule)
1
16S rRNA
Molecule annotation
Chemicals and Non-standard biopolymers (42 molecules)
1
14
POTASSIUM IONPOTASSIUM ION
2
1
OmadacyclineOmadacycline
3
1
SPECTINOMYCINSPECTINOMYCIN
4
26
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303