8ESQ: Ytm1 associated nascent 60S ribosome State 2

PDB ID: 8ESQDownload
MMDB ID: 223928
PDB Deposition Date: 2022/10/14
Updated in MMDB: 2022/12
Experimental Method:
electron microscopy
Resolution: 2.8  Å
Source Organism:
Similar Structures:
Biological Unit for 8ESQ: 58-meric; determined by author
Molecular Components in 8ESQ
Label Count Molecule
Proteins (55 molecules)
1
Noc2
Molecule annotation
1
Protein Mak16
Molecule annotation
1
60S Ribosomal Protein L39
Molecule annotation
1
Ribosome Biogenesis Protein Brx1
Molecule annotation
1
60S Ribosomal Protein L3-a
Molecule annotation
1
60S Ribosomal Protein L4-b
Molecule annotation
1
Atp-dependent RNA Helicase Has1
Molecule annotation
1
60S Ribosomal Protein L6
Molecule annotation
1
60S Ribosomal Protein L7-b
Molecule annotation
1
60S Ribosomal Protein L8
Molecule annotation
1
60S Ribosomal Protein L9-a
Molecule annotation
1
Nucleolar Complex-associated Protein 3
Molecule annotation
1
Probable rRNA-processing Protein Ebp2
Molecule annotation
1
Putative Ribosome Biogenesis Protein C8f11.04
Molecule annotation
1
60S Ribosomal Protein L13
Molecule annotation
1
60S Ribosomal Protein L14
Molecule annotation
1
60S Ribosomal Protein L15-a
Molecule annotation
1
60S Ribosomal Protein L16-b
Molecule annotation
1
60S Ribosomal Protein L17-a
Molecule annotation
1
60S Ribosomal Protein L18-a
Molecule annotation
1
60S Ribosomal Protein L19-a
Molecule annotation
1
60S Ribosomal Protein L20-a
Molecule annotation
1
60S Ribosomal Protein L22
Molecule annotation
1
60S Ribosomal Protein L23-a
Molecule annotation
1
Ribosome Assembly Factor Mrt4
Molecule annotation
1
60S Ribosomal Protein L25-a
Molecule annotation
1
60S Ribosomal Protein L26
Molecule annotation
1
60S Ribosomal Protein L27-a
Molecule annotation
1
60S Ribosomal Protein L28-a
Molecule annotation
1
Probable Nucleolar Gtp-binding Protein 1
Molecule annotation
1
60S Ribosomal Protein L30-2
Molecule annotation
1
60S Ribosomal Protein L31
Molecule annotation
1
60S Ribosomal Protein L32-a
Molecule annotation
1
60S Ribosomal Protein L33-b
Molecule annotation
1
60S Ribosomal Protein L34-a
Molecule annotation
1
60S Ribosomal Protein L35
Molecule annotation
1
60S Ribosomal Protein L36-b
Molecule annotation
1
60S Ribosomal Protein L37-b
Molecule annotation
1
60S Ribosomal Protein L38-1
Molecule annotation
1
60S Ribosome Subunit Biogenesis Protein Nip7
Molecule annotation
1
Ribosome Biogenesis Protein Erb1
Molecule annotation
1
Pescadillo Homolog
Molecule annotation
1
Uncharacterized RNA-binding Protein C1827.05c
Molecule annotation
1
Ribosome Biogenesis Protein Ytm1
Molecule annotation
1
25S rRNA (Cytosine-c(5))-methyltransferase Nop2
Molecule annotation
1
Ribosome Biogenesis Protein Nsa2
Molecule annotation
1
Gtpase Grn1
Molecule annotation
1
60S Ribosomal Protein L7-a
Molecule annotation
1
Ribosome Biogenesis Protein Rlp24
Molecule annotation
1
Nucleolar Protein 16
Molecule annotation
1
Adomet-dependent rRNA Methyltransferase Spb1
Molecule annotation
1
Brix Domain-containing Protein C4f8.04
Molecule annotation
1
Eukaryotic Translation Initiation Factor 6
Molecule annotation
1
Upf0642 Protein C32h8.05
Molecule annotation
1
60S Ribosomal Protein L21-a
Molecule annotation
Nucleotides(3 molecules)
1
RNA (2231-mer)
Molecule annotation
1
RNA (150-mer)
Molecule annotation
1
RNA (81-mer)
Molecule annotation
Chemical and Non-standard biopolymers (1 molecule)
1
* Click molecule labels to explore molecular sequence information.

Citing MMDB