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Biotechnology Information

8HE5: RNA polymerase II elongation complex bound with Rad26 and Elf1, stalled at SHL(-3.5) of the nucleosome

PDB ID:

MMDB ID:

232517

PDB Deposition Date:

2022/11/7

Updated in MMDB:

2024/07

Experimental Method:

electron microscopy

Resolution:

6.95 Å

Source Organism:

Komagataella phaffii▼

Similar Structures:

Biological Unit for 8HE5: 25-meric; determined by author

Molecular Components in 8HE5
Label	Count	Molecule
Proteins (22 molecules)
A	1	DNA-directed RNA Polymerase Subunit
B	1	DNA-directed RNA Polymerase Subunit Beta
C	1	RNA Polymerase II Third Largest Subunit B44, Part of Central Core
D	1	RNA Polymerase II Subunit B32
E	1	DNA-directed RNA Polymerases I, II, and III Subunit Rpabc1
F	1	RNA Polymerase Subunit Abc23, Common to RNA Polymerases I, II, and III
G	1	RNA Polymerase II Subunit
H	1	DNA-directed RNA Polymerases I, II, and III Subunit Rpabc3
I	1	DNA-directed RNA Polymerase Subunit
J	1	RNA Polymerase Subunit Abc10-beta, Common to RNA Polymerases I, II, and III
K	1	RNA Polymerase II Subunit B12.5
L	1	RNA Polymerase Subunit Abc10-alpha
M	1	Transcription Elongation Factor 1 Homolog
O	1	DNA Repair Protein
a e	2	Histone H3.1
b f	2	Histone H4
c g	2	Histone H2A Type 1-b/e
d h	2	Histone H2B Type 1-J
Nucleotides(3 molecules)
N	1	DNA (198-mer)
P	1	RNA (5'-r(pgpupupupupcpgpupupgpupupupupupu)-3')
T	1	DNA (198-mer)
Chemicals and Non-standard biopolymers (10 molecules)
1	9	ZINC ION
2	1	MAGNESIUM ION

* Click molecule labels to explore molecular sequence information.

Citing MMDB