8OLZ: Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 2h30 soaking

PDB ID: 8OLZDownload
MMDB ID: 248458
PDB Deposition Date: 2023/3/30
Updated in MMDB: 2024/07
Experimental Method:
x-ray diffraction
Resolution: 3.31  Å
Source Organism:
Biological Unit for 8OLZ: dimeric; determined by author and by software
Molecular Components in 8OLZ
Label Count Molecule
Nucleotides(2 molecules)
1
Domains 1-5
Molecule annotation
1
5'-exon
Molecule annotation
Chemicals and Non-standard biopolymers (53 molecules)
1
30
MAGNESIUM IONMAGNESIUM ION
2
18
POTASSIUM IONPOTASSIUM ION
3
1
SPERMINESPERMINE
4
3
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
5
1
~{N}-(2-pyrrolidin-1-ylethyl)-2-[3,4,5-tris(oxidanyl)phenyl]carbonyl-1-benzofuran-5-carboxamide~{N}-(2-pyrrolidin-1-ylethyl)-2-[3,4,5-tris(oxidanyl)phenyl]carbonyl-1-benzofuran-5-carboxamide
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303