8QHR: Crystal structure of the human DNPH1 glycosyl-enzyme intermediate

PDB ID: 8QHRDownload
MMDB ID: 238287
PDB Deposition Date: 2023/9/9
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 1.65  Å
Source Organism:
Similar Structures:
Biological Unit for 8QHR: dimeric; determined by author and by software
Molecular Components in 8QHR
Label Count Molecule
Proteins (2 molecules)
2
2'-deoxynucleoside 5'-phosphate N-hydrolase 1
(Gene symbol: DNPH1)
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
2
1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE
2
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
3
1
2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303