8TLT: Cryo-EM structure of Rev1(deltaN)-Polzeta-DNA-dCTP complex

PDB ID: 8TLTDownload
MMDB ID: 247032
PDB Deposition Date: 2023/7/27
Updated in MMDB: 2024/05
Experimental Method:
electron microscopy
Resolution: 2.85  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 8TLT: octameric; determined by author
Molecular Components in 8TLT
Label Count Molecule
Proteins (6 molecules)
1
DNA Polymerase Zeta Catalytic Subunit
Molecule annotation
2
DNA Polymerase Zeta Processivity Subunit
Molecule annotation
1
DNA Polymerase Delta Small Subunit
Molecule annotation
1
DNA Polymerase Delta Subunit 3
Molecule annotation
1
DNA Repair Protein Rev1
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(p*cp*cp*cp*tp*cp*cp*cp*cp*tp*ap*c)-3')
Molecule annotation
1
DNA (5'-d(*tp*ap*ap*tp*gp*gp*tp*ap*gp*gp*gp*gp*ap*gp*gp*gp*ap*ap*t)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
IRON/SULFUR CLUSTERIRON/SULFUR CLUSTER
2
1
CALCIUM IONCALCIUM ION
3
1
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303