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Source database (GenBank or RefSeq) File type

ASM336280v1

Organism name:: Neobacillus piezotolerans (firmicutes)
Taxonomy check:: OK
Infraspecific name:: Strain: YLB-04
BioSample:: SAMN09531617
BioProject:: PRJNA478794
Submitter:: Third Institute of Oceanography, State of Oceanic Administration
Date:: 2018/08/06
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
RefSeq category:: representative genome
Relation to type material:: assembly from type material
GenBank assembly accession:: GCA_003362805.1 (latest)
RefSeq assembly accession:: GCF_003362805.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: QNQT01
Assembly method:: SPAdes v. 3.8.1
Expected final version:: yes
Genome coverage:: 200.0x
Sequencing technology:: IIIumina HiSeq

IDs: 1855241 [UID] 7016548 [GenBank] 7040998 [RefSeq]

See Genome Information for Neobacillus piezotolerans

Pathogen Detection Resources

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_003362805.1	=	GCF_003362805.1	ASM336280v1	Contig	Latest GenBank, Latest RefSeq

Comment

Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
Bacteria and source DNA available from MCCC 1A12711.

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI
Annotation Date::07/03/2018 13:15:57
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline
Annotation Method::Best-placed reference protein set; GeneMarkS+
Annotation Software revision::4.5
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total)::4,519
CDS (total)::4,461
Genes (coding)::4,395
CDS (coding)::4,395
Genes (RNA)::58
rRNAs::1 (5S)
complete rRNAs::1 (5S)
tRNAs::52
ncRNAs::5
Pseudo Genes (total)::66
Pseudo Genes (ambiguous residues)::0 of 66
Pseudo Genes (frameshifted)::32 of 66
Pseudo Genes (incomplete)::30 of 66
Pseudo Genes (internal stop)::14 of 66
Pseudo Genes (multiple problems)::8 of 66
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	4,528,037
Total ungapped length	4,528,037
Number of contigs	36
Contig N50	438,614
Contig L50	3
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	36

	ANI	Query coverage	Subject coverage
Declared type	na	na	na
Best-match type	81.23	11.04	10.44

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ASM336280v1

See Genome Information for Neobacillus piezotolerans

Pathogen Detection Resources

History (Show revision history)

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