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Source database (GenBank or RefSeq) File type

mMirAng1.0.hap1

Organism name:

Mirounga angustirostris (Northern elephant seal)

Isolate:

CCGP_5_RB_7025

Sex:

female

BioSample:

SAMN33386026

BioProject:

PRJNA937321

Submitter:

UCLA

Date:

2023/03/14

Assembly level:

Scaffold

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_029215605.1 (latest)

RefSeq assembly accession:

GCF_029215605.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in GenBank: chromosome MT

Data displayed for RefSeq version

WGS Project:

JARDRN01

Assembly method:

HiFiasm v. 0.16.1-r375; SALSA v. 2; Rapid Curation v. https://gitlab.com/wtsi-grit/rapid-curation (commit 4ddca450)

Expected final version:

Genome coverage:

35.12x

Sequencing technology:

Illumina NovaSeq; Dovetail OmniC; PacBio Sequel II; PacBio Sequel IIe

IDs: 16180061 [UID] 41480378 [GenBank] 56432678 [RefSeq]

See Genome Information for Mirounga angustirostris

Pathogen Detection Resources

There are 4 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_029215605.1	≠	GCF_029215605.1	mMirAng1.0.hap1	Scaffold	Latest GenBank, Latest RefSeq

Comment

The mitochondrial genome (sequence JARDRN010000498.1) was generated with MitoHiFi (V2.2) using the existing Mirounga leonina mitochondrial sequence (NC_008422.1) as a reference

Global statistics

Total sequence length	2,430,305,188
Total ungapped length	2,430,295,388
Gaps between scaffolds	0
Number of scaffolds	497
Scaffold N50	154,172,358
Scaffold L50	7
Number of contigs	595
Contig N50	58,074,836
Contig L50	14
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	497

Assembly

Genome Assembly

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mMirAng1.0.hap1

See Genome Information for Mirounga angustirostris

Pathogen Detection Resources

There are 4 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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