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ASM231183v1

Organism name:
Proteobacteria bacterium UBA1148 (proteobacteria)
Taxonomy check:
Inconclusive
Isolate:
UBA1148
BioSample:
SAMN06452099
BioProject:
PRJNA348753
Submitter:
University of Queensland
Date:
2017/09/19
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_002311835.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
DBZY01
Assembly method:
CLC de novo assembler v. 4.4.1
Expected final version:
yes
Genome coverage:
7.36x
Sequencing technology:
Illumina

IDs: 1202611 [UID] 5027888 [GenBank]

See Genome Information for Proteobacteria bacterium UBA1148

History (Show revision history)

Comment

Global statistics

Total sequence length2,630,887
Total ungapped length2,600,016
Gaps between scaffolds0
Number of scaffolds117
Scaffold N5041,590
Scaffold L5017
Number of contigs389
Contig N5020,601
Contig L5041
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)117

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,630,8871172,600,01641,5902720

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Proteobacteria bacterium UBA1148Proteobacteria bacterium UBA1148

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
none-foundnana

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match typena0.000.00

ANI result

Taxonomy check statusBest match statusComment
Inconclusivenana