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ASM243483v1

Organism name:
Candidatus Marinimicrobia bacterium UBA6529 (bacteria)
Taxonomy check:
Inconclusive
Isolate:
UBA6529
BioSample:
SAMN06457265
BioProject:
PRJNA348753
Submitter:
University of Queensland
Date:
2017/10/04
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_002434835.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
DJKZ01
Assembly method:
CLC de novo assembler v. 4.4.1
Expected final version:
yes
Genome coverage:
234.25x
Sequencing technology:
Illumina

IDs: 1266491 [UID] 5177518 [GenBank]

See Genome Information for Candidatus Marinimicrobia bacterium UBA6529

History (Show revision history)

Comment

Global statistics

Total sequence length1,861,326
Total ungapped length1,800,321
Gaps between scaffolds0
Number of scaffolds147
Scaffold N5015,545
Scaffold L5033
Number of contigs319
Contig N509,174
Contig L5057
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)147

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,861,3261471,800,32115,5451720

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Candidatus Marinimicrobia bacterium UBA6529Candidatus Marinimicrobia bacterium UBA6529

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
none-foundnana

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match typena0.000.00

ANI result

Taxonomy check statusBest match statusComment
Inconclusivenana