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ASM336952v1

Organism name:
bacterium 0274-1 (bacteria)
Taxonomy check:
Inconclusive
Isolate:
0274-1
BioSample:
SAMN09745297
BioProject:
PRJNA483775
Submitter:
Oklahoma State University
Date:
2018/08/10
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_003369525.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
QTKD01
Assembly method:
MegaHit v. 1.0.5
Expected final version:
yes
Genome coverage:
11.42x
Sequencing technology:
Illumina HiSeq

IDs: 1861031 [UID] 7055948 [GenBank]

See Genome Information for bacterium 0274-1

History (Show revision history)

Comment

Global statistics

Total sequence length1,183,562
Total ungapped length1,183,562
Number of contigs106
Contig N5017,711
Contig L5022
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)106

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,183,5621061,183,56217,71100

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
bacterium 0274-1bacterium 0274-1

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000183545.3Thermaerobacter subterraneustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type79.910.100.04

ANI result

Taxonomy check statusBest match statusComment
Inconclusivelow-coveragena