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PI306540_Tmono

Organism name:
Triticum monococcum (monocots)
Infraspecific name:
Cultivar: PI 306540
BioSample:
SAMN36409019
BioProject:
PRJNA993781
Submitter:
Peking University Instutute of Advanced Agricultural Sciences
Date:
2023/12/27
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_034509565.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAWJKA01
Assembly method:
hifiasm v. 0.16.1
Expected final version:
yes
Genome coverage:
35.0x
Sequencing technology:
PacBio Sequel

IDs: 20366901 [UID] 51510058 [GenBank]

See Genome Information for Triticum monococcum

History (Show revision history)

Comment

Global statistics

Total sequence length5,115,539,301
Total ungapped length5,115,282,781
Gaps between scaffolds0
Number of scaffolds11
Scaffold N50728,660,354
Scaffold L504
Number of contigs223
Contig N50131,199,207
Contig L5012
Total number of chromosomes and plasmids7
Number of component sequences (WGS or clone)11

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_034509635.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM067841.1n/an/a0
Chromosome 2CM067842.1n/an/a0
Chromosome 3CM067843.1n/an/a0
Chromosome 4CM067844.1n/an/a0
Chromosome 5CM067845.1n/an/a0
Chromosome 6CM067846.1n/an/a0
Chromosome 7CM067847.1n/an/a0
unplacedn/an/an/a4

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All5,115,539,301115,115,282,781728,660,3542120
Chromosome 1644,540,1801644,385,300644,540,1801280
Chromosome 2829,514,1161829,493,546829,514,116170
Chromosome 3823,191,4421823,172,082823,191,442160
Chromosome 4658,233,6831658,215,533658,233,683150
Chromosome 5728,660,3541728,645,834728,660,354120
Chromosome 6636,012,2291636,000,129636,012,229100
Chromosome 7794,533,2471794,516,307794,533,247140
unplaced854,0504854,050230,72000