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ASM640878v2

Organism name:
Syncerus caffer (African buffalo)
Isolate:
ABF-221
BioSample:
SAMN08714496
BioProject:
PRJNA438286
Submitter:
Northwestern Polytechnical University
Date:
2021/12/01
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_006408785.2 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
SJXX02
Assembly method:
platanus v. 1.2.4
Expected final version:
no
Genome coverage:
162x
Sequencing technology:
Illumina HiSeq

IDs: 11532731 [UID] 30366968 [GenBank]

See Genome Information for Syncerus caffer

There are 3 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,929,436,968
Total ungapped length2,869,491,007
Gaps between scaffolds0
Number of scaffolds148,371
Scaffold N502,316,376
Scaffold L50382
Number of contigs248,901
Contig N5052,316
Contig L5015,319
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)148,371

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,929,436,968148,3712,869,491,0072,316,376100,5300