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Source database (GenBank or RefSeq) File type

ASM1618811v1

Organism name:

Candidatus Woesearchaeota archaeon (archaea)

Taxonomy check:

Inconclusive

Isolate:

NC_groundwater_438_Ag_B-0.1um_39_47

BioSample:

SAMN15434934

BioProject:

PRJNA640378

Submitter:

Innovative Genomics Institute

Date:

2020/12/21

Assembly type:

Assembly level:

Contig

Genome representation:

full

Excluded from RefSeq:

derived from metagenome
genus undefined

GenBank assembly accession:

GCA_016188115.1 (latest)

RefSeq assembly accession:

n/a

RefSeq assembly and GenBank assembly identical:

n/a

WGS Project:

JACPIK01

Assembly method:

MEGAHIT v. 1.2.9

Expected final version:

yes

Genome coverage:

38.62x

Sequencing technology:

Illumina NovaSeq

IDs: 8901441 [UID] 24067828 [GenBank]

See Genome Information for Candidatus Woesearchaeota archaeon

Pathogen Detection Resources

There are 710 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_016188115.1	n/a	n/a	ASM1618811v1	Contig	Latest GenBank

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI
Annotation Date::08/21/2020 00:31:42
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::4.12
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total)::1,589
CDSs (total)::1,551
Genes (coding)::1,551
CDSs (with protein)::1,551
Genes (RNA)::38
rRNAs::1, 1, 1 (5S, 16S, 23S)
complete rRNAs::1, 1, 1 (5S, 16S, 23S)
tRNAs::34
ncRNAs::1
Pseudo Genes (total)::0
CDSs (without protein)::0
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	1,479,238
Total ungapped length	1,479,238
Number of contigs	2
Contig N50	1,471,151
Contig L50	1
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	2

	ANI	Query coverage	Subject coverage
Declared type	na	na	na
Best-match type	na	0.00	0.00

Assembly

Genome Assembly

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Download Assembly

ASM1618811v1

See Genome Information for Candidatus Woesearchaeota archaeon

Pathogen Detection Resources

There are 710 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

Global statistics

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Taxonomy Check Data

Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

ANI result