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ASM1797383v1

Organism name:
aquifer metagenome (metagenomes)
BioSample:
SAMN14733005
BioProject:
PRJNA628506
Submitter:
University Duisburg-Essen
Date:
2021/04/15
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • fragmented assembly
  • genus undefined
  • metagenome
GenBank assembly accession:
GCA_017973835.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAEMOK01
Assembly method:
SPAdes v. 3.10
Expected final version:
yes
Genome coverage:
Not Applicable
Sequencing technology:
Illumina

IDs: 9847471 [UID] 26267708 [GenBank]

There are 6 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length58,915,523
Total ungapped length58,874,607
Gaps between scaffolds0
Number of scaffolds22,326
Scaffold N503,116
Scaffold L503,407
Number of contigs23,457
Contig N503,035
Contig L503,544
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)22,326

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced58,915,52322,32658,874,6073,1161,1310