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BRT_1.0

Organism name:
Brassica rapa subsp. rapa (turnip)
Isolate:
ECD4
BioSample:
SAMN17245291
BioProject:
PRJNA690160
Submitter:
TheragenBio
Date:
2021/06/16
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_018901965.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAEOXI01
Assembly method:
CANU v. 1.8
Expected final version:
yes
Genome coverage:
136.36x
Sequencing technology:
PacBio Sequel II

IDs: 10314361 [UID] 27410728 [GenBank]

See Genome Information for Brassica rapa

There are 9 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length315,759,672
Total ungapped length315,740,060
Gaps between scaffolds0
Number of scaffolds655
Scaffold N501,448,451
Scaffold L5041
Number of contigs711
Contig N501,248,795
Contig L5049
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)655

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced315,759,672655315,740,0601,448,451560